Sunday, November 16, 2008

SfN Wifi WTF?

Dear SfN,

Your wireless sucks.

Signed,
Everyone

(Posted from my laptop tethered to my iPhone, which is infinitely faster. That's sad.)

Friday, November 14, 2008

Wednesday, November 12, 2008

SPF format follow-up

I've heard back from a few people, and I think the new format works much better than the previous ones. I am posting the EndNote libraries (ENL files, not papers) to my DropBox account, which seems to work well - just a quick right click for me and no accounts needed for everyone else. If you don't have a drop box account, no need to get one, but it does rock. Personally, I like Microsoft's Live Mesh more, but there's no option to share with people outside the service (now with Mac and Linux Clients).

One person posted that fewer items with a brief rundown would be helpful. The only reason for the long list this tome was that it was the first SPF in over a month, so wading through the papers should be easier when I am good about posting weekly. As for abstracts, there are two options:

1) The links are to the PubMed entry, usually, which means that you can find the papers that look interesting from the titles and stack up a bunch of tabs in the background (hold down control in FF or IE when clicking the link, and if it opens as the active tab, check your preferences). So, the easiest thing to do is just control-click down the list when something piques your interest and load up a bunch of tabs. Do a quick perusal of the abstracts and close the tabs for those that don't interest you.
2) Alternatively, use the EndNote file, which has the abstract included (usually).

I'll try to single out a top 5 or 10 and post them at the top with a brief 1-3 sentences, but they are going to be the ones that I like, meaning they might not mesh with your interests (particularly, there will probably be few EEG/ECoG papers). I do read all the abstracts for these, and they all hit on something worthwhile or of personal interest, so it isn't like I just dump my feeds into the list. The 30 or so weekly papers are chosen out of around 500-1000 that make it to my aggregator, so a great deal of filtering is already in place. I have expanded the criteria a little since beginning in the interest of the site, but that means I no longer read all the papers posted. (I also have a few each week that I don't post for person interest and to keep everyone's idea of my exact project purposely murky.)

So, things will keep evolving, but this is a good start, IMO.

Tuesday, November 11, 2008

Super Paper Friday!

I declare today to be Friday!

New setup: Using boring old EndNote, filtering the feeds in Google reader, and then copy and pasting the PMIDs. Use EndNote to remove the duplicates and download the PDFs. The PDF download in EndNote is okay-ish - only missed 36 out of 188 items. And no, no idea why each citation has [pii] at the end (probably interpreting the new line character weirdly).

Oh, and here's the EndNote library file. Thanks Remy for the suggestion! Post a quick comment to let me know if it works.

Ahmed, A. A., Wolpert, D. M. and Flanagan, J. R. Flexible representations of dynamics are used in object manipulation. Curr Biol 18, 763-8, doi:S0960-9822(08)00583-6 [pii]
10.1016/j.cub.2008.04.061 (2008).
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Ajemian, R., Green, A., Bullock, D., Sergio, L., Kalaska, J. and Grossberg, S. Assessing the function of motor cortex: single-neuron models of how neural response is modulated by limb biomechanics. Neuron 58, 414-28, doi:S0896-6273(08)00221-3 [pii]
10.1016/j.neuron.2008.02.033 (2008).
Link.

Alaerts, K., Heremans, E., Swinnen, S. P. and Wenderoth, N. How are observed actions mapped to the observer's motor system? Influence of posture and perspective. Neuropsychologia, doi:S0028-3932(08)00380-1 [pii]
10.1016/j.neuropsychologia.2008.09.012 (2008).
Link.

Amici, F., Aureli, F. and Call, J. Fission-fusion dynamics, behavioral flexibility, and inhibitory control in primates. Curr Biol 18, 1415-9, doi:S0960-9822(08)01096-8 [pii]
10.1016/j.cub.2008.08.020 (2008).
Link.

Antal, A., Begemeier, S., Nitsche, M. A. and Paulus, W. Prior state of cortical activity influences subsequent practicing of a visuomotor coordination task. Neuropsychologia 46, 3157-61, doi:S0028-3932(08)00295-9 [pii]
10.1016/j.neuropsychologia.2008.07.007 (2008).
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Asaad, W. F. and Eskandar, E. N. Achieving behavioral control with millisecond resolution in a high-level programming environment. J Neurosci Methods 173, 235-40, doi:S0165-0270(08)00337-3 [pii]
10.1016/j.jneumeth.2008.06.003 (2008).
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Badets, A. and Pesenti, M. The effects of intention and practice on a non-motor duration estimation task. Acta Psychol (Amst) 129, 243-8, doi:S0001-6918(08)00088-7 [pii]
10.1016/j.actpsy.2008.06.006 (2008).
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Barriere, G., Leblond, H., Provencher, J. and Rossignol, S. Prominent role of the spinal central pattern generator in the recovery of locomotion after partial spinal cord injuries. J Neurosci 28, 3976-87, doi:28/15/3976 [pii]
10.1523/JNEUROSCI.5692-07.2008 (2008).
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Bartels, J., Andreasen, D., Ehirim, P., Mao, H., Seibert, S., Wright, E. J. and Kennedy, P. Neurotrophic electrode: method of assembly and implantation into human motor speech cortex. J Neurosci Methods 174, 168-76, doi:S0165-0270(08)00386-5 [pii]
10.1016/j.jneumeth.2008.06.030 (2008).
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Bedny, M., Caramazza, A., Grossman, E., Pascual-Leone, A. and Saxe, R. Concepts are more than percepts: the case of action verbs. J Neurosci 28, 11347-53, doi:28/44/11347 [pii]
10.1523/JNEUROSCI.3039-08.2008 (2008).
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Belin, D., Jonkman, S., Dickinson, A., Robbins, T. W. and Everitt, B. J. Parallel and interactive learning processes within the basal ganglia: Relevance for the understanding of addiction. Behav Brain Res, doi:S0166-4328(08)00535-4 [pii]
10.1016/j.bbr.2008.09.027 (2008).
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Berens, P., Keliris, G. A., Ecker, A. S., Logothetis, N. K. and Tolias, A. S. Comparing the feature selectivity of the gamma-band of the local field potential and the underlying spiking activity in primate visual cortex. Front Syst Neurosci 2, 2, doi:10.3389/neuro.06.002.2008 (2008).
Link.

Berryhill, M. E. and Olson, I. R. The right parietal lobe is critical for visual working memory. Neuropsychologia 46, 1767-74, doi:S0028-3932(08)00011-0 [pii]
10.1016/j.neuropsychologia.2008.01.009 (2008).
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Bestmann, S., Harrison, L. M., Blankenburg, F., Mars, R. B., Haggard, P., Friston, K. J. and Rothwell, J. C. Influence of uncertainty and surprise on human corticospinal excitability during preparation for action. Curr Biol 18, 775-80, doi:S0960-9822(08)00537-X [pii]
10.1016/j.cub.2008.04.051 (2008).
Link.

Bhattacharya, S., Samanta, D. and Basu, A. Performance models for automatic evaluation of virtual scanning keyboards. IEEE Trans Neural Syst Rehabil Eng 16, 510-9, doi:10.1109/TNSRE.2008.2003377 (2008).
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Birbaumer, N., Murguialday, A. R. and Cohen, L. Brain-computer interface in paralysis. Curr Opin Neurol 21, 634-638, doi:10.1097/WCO.0b013e328315ee2d
00019052-200812000-00004 [pii] (2008).
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Blankertz, B., Losch, F., Krauledat, M., Dornhege, G., Curio, G. and Muller, K. R. The Berlin Brain--Computer Interface: accurate performance from first-session in BCI-naive subjects. IEEE Trans Biomed Eng 55, 2452-62, doi:10.1109/TBME.2008.923152 (2008).
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Bohannon, J. The Gonzo Scientist. Flunking Spore. Science 322, 531, doi:322/5901/531b [pii]
10.1126/science.322.5901.531b (2008).
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Bohannon, J. Video games. 'Spore' documentary spawns protest by scientists who starred in it. Science 322, 517, doi:322/5901/517a [pii]
10.1126/science.322.5901.517a (2008).
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Borroni, P. and Baldissera, F. Activation of motor pathways during observation and execution of hand movements. Soc Neurosci 3, 276-88, doi:780817558 [pii]
10.1080/17470910701515269 (2008).
Link.

Borroni, P., Montagna, M., Cerri, G. and Baldissera, F. Bilateral motor resonance evoked by observation of a one-hand movement: role of the primary motor cortex. Eur J Neurosci 28, 1427-35, doi:EJN6458 [pii]
10.1111/j.1460-9568.2008.06458.x (2008).
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Brader, J. M., Senn, W. and Fusi, S. Learning real-world stimuli in a neural network with spike-driven synaptic dynamics. Neural Comput 19, 2881-912, doi:10.1162/neco.2007.19.11.2881 (2007).
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Brawn, T. P., Fenn, K. M., Nusbaum, H. C. and Margoliash, D. Consolidation of sensorimotor learning during sleep. Learn Mem 15, 815-9, doi:15/11/815 [pii]
10.1101/lm.1180908 (2008).
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Bridgeman, B. and Hoover, M. Processing spatial layout by perception and sensorimotor interaction. Q J Exp Psychol (Colchester) 61, 851-9, doi:790357931 [pii]
10.1080/17470210701623712 (2008).
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Brown, L. E., Wilson, E. T. and Gribble, P. L. Repetitive Transcranial Magnetic Stimulation to the Primary Motor Cortex Interferes with Motor Learning by Observing. J Cogn Neurosci, doi:10.1162/jocn.2009.21079 (2008).
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Brown, S. D. and Steyvers, M. Detecting and predicting changes. Cognit Psychol, doi:S0010-0285(08)00060-1 [pii]
10.1016/j.cogpsych.2008.09.002 (2008).
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Bullock, T. H. Non-integrative synapses. Biol Bull 95, 249 (1948).
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Cabrera, A. F. and Dremstrup, K. Auditory and spatial navigation imagery in Brain-Computer Interface using optimized wavelets. J Neurosci Methods 174, 135-46, doi:S0165-0270(08)00387-7 [pii]
10.1016/j.jneumeth.2008.06.026 (2008).
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Calton, J. L. and Taube, J. S. Where am I and how will I get there from here? A role for posterior parietal cortex in the integration of spatial information and route planning. Neurobiol Learn Mem, doi:S1074-7427(08)00181-0 [pii]
10.1016/j.nlm.2008.09.015 (2008).
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Candidi, M., Urgesi, C., Ionta, S. and Aglioti, S. M. Virtual lesion of ventral premotor cortex impairs visual perception of biomechanically possible but not impossible actions. Soc Neurosci 3, 388-400, doi:783046525 [pii]
10.1080/17470910701676269 (2008).
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Cao, X., Wang, H., Mei, B., An, S., Yin, L., Wang, L. P. and Tsien, J. Z. Inducible and selective erasure of memories in the mouse brain via chemical-genetic manipulation. Neuron 60, 353-66, doi:S0896-6273(08)00768-X [pii]
10.1016/j.neuron.2008.08.027 (2008).
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Carp, J. S., Tennissen, A. M., Mongeluzi, D. L., Dudek, C. J., Chen, X. Y. and Wolpaw, J. R. An in vitro protocol for recording from spinal motoneurons of adult rats. J Neurophysiol 100, 474-81, doi:90422.2008 [pii]
10.1152/jn.90422.2008 (2008).
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Carrillo-de-la-Pena, M. T., Galdo-Alvarez, S. and Lastra-Barreira, C. Equivalent is not equal: primary motor cortex (MI) activation during motor imagery and execution of sequential movements. Brain Res 1226, 134-43, doi:S0006-8993(08)01369-3 [pii]
10.1016/j.brainres.2008.05.089 (2008).
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Chaminade, T., Hodgins, J. and Kawato, M. Anthropomorphism influences perception of computer-animated characters' actions. Soc Cogn Affect Neurosci 2, 206-216, doi:10.1093/scan/nsm017 (2007).
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Chowdhury, S. A. and DeAngelis, G. C. Fine discrimination training alters the causal contribution of macaque area MT to depth perception. Neuron 60, 367-77, doi:S0896-6273(08)00749-6 [pii]
10.1016/j.neuron.2008.08.023 (2008).
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Coello, Y., Bartolo, A., Amiri, B., Devanne, H., Houdayer, E. and Derambure, P. Perceiving what is reachable depends on motor representations: evidence from a transcranial magnetic stimulation study. PLoS ONE 3, e2862, doi:10.1371/journal.pone.0002862 (2008).
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Cohen, M. R. and Newsome, W. T. Context-dependent changes in functional circuitry in visual area MT. Neuron 60, 162-73, doi:S0896-6273(08)00675-2 [pii]
10.1016/j.neuron.2008.08.007 (2008).
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Cohen, M. X. and Frank, M. J. Neurocomputational models of basal ganglia function in learning, memory and choice. Behav Brain Res, doi:S0166-4328(08)00542-1 [pii]
10.1016/j.bbr.2008.09.029 (2008).
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Cohen, R. G. and Sternad, D. Variability in motor learning: relocating, channeling and reducing noise. Exp Brain Res, doi:10.1007/s00221-008-1596-1 (2008).
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Corey, D. P. and Movshon, J. A. Sensory systems: from molecules to percepts. Curr Opin Neurobiol 18, 355-6, doi:S0959-4388(08)00129-3 [pii]
10.1016/j.conb.2008.10.002 (2008).
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Costantini, M., Committeri, G. and Galati, G. Effector- and target-independent representation of observed actions: evidence from incidental repetition priming. Exp Brain Res 188, 341-51, doi:10.1007/s00221-008-1369-x (2008).
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Da Cunha, C., Wietzikoski, E. C., Dombrowski, P., Bortolanza, M., Santos, L. M., Boschen, S. L. and Miyoshi, E. Learning processing in the basal ganglia: A mosaic of broken mirrors. Behav Brain Res, doi:S0166-4328(08)00554-8 [pii]
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de Lange, F. P., Jensen, O., Bauer, M. and Toni, I. Interactions between posterior gamma and frontal alpha/beta oscillations during imagined actions. Front Hum Neurosci 2, 7, doi:10.3389/neuro.09.007.2008 (2008).
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de Lange, F. P., Roelofs, K. and Toni, I. Motor imagery: a window into the mechanisms and alterations of the motor system. Cortex 44, 494-506, doi:S0010-9452(07)00114-1 [pii]
10.1016/j.cortex.2007.09.002 (2008).
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Di Filippo, M., Picconi, B., Tantucci, M., Ghiglieri, V., Bagetta, V., Sgobio, C., Tozzi, A., Parnetti, L. and Calabresi, P. Short-term and long-term plasticity at corticostriatal synapses: Implications for learning and memory. Behav Brain Res, doi:S0166-4328(08)00528-7 [pii]
10.1016/j.bbr.2008.09.025 (2008).
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Dias, N. S., Kamrunnahar, M., Mendes, P. M., Schiff, S. J. and Correia, J. H. Comparison of EEG pattern classification methods for brain-computer interfaces. Conf Proc IEEE Eng Med Biol Soc 2007, 2540-3, doi:10.1109/IEMBS.2007.4352846 (2007).
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Dinstein, I., Gardner, J. L., Jazayeri, M. and Heeger, D. J. Executed and observed movements have different distributed representations in human aIPS. J Neurosci 28, 11231-9, doi:28/44/11231 [pii]
10.1523/JNEUROSCI.3585-08.2008 (2008).
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Donaldson, Z. R. and Young, L. J. Oxytocin, vasopressin, and the neurogenetics of sociality. Science 322, 900-4, doi:322/5903/900 [pii]
10.1126/science.1158668 (2008).
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Draganski, B., Kherif, F., Kloppel, S., Cook, P. A., Alexander, D. C., Parker, G. J., Deichmann, R., Ashburner, J. and Frackowiak, R. S. Evidence for segregated and integrative connectivity patterns in the human Basal Ganglia. J Neurosci 28, 7143-52, doi:28/28/7143 [pii]
10.1523/JNEUROSCI.1486-08.2008 (2008).
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Dunlop, S. A. Activity-dependent plasticity: implications for recovery after spinal cord injury. Trends Neurosci 31, 410-8, doi:S0166-2236(08)00147-1 [pii]
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Engel, A., Burke, M., Fiehler, K., Bien, S. and Rosler, F. What activates the human mirror neuron system during observation of artificial movements: bottom-up visual features or top-down intentions? Neuropsychologia 46, 2033-42, doi:S0028-3932(08)00060-2 [pii]
10.1016/j.neuropsychologia.2008.01.025 (2008).
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Enticott, P. G., Johnston, P. J., Herring, S. E., Hoy, K. E. and Fitzgerald, P. B. Mirror neuron activation is associated with facial emotion processing. Neuropsychologia 46, 2851-4, doi:S0028-3932(08)00190-5 [pii]
10.1016/j.neuropsychologia.2008.04.022 (2008).
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Enzinger, C., Ropele, S., Fazekas, F., Loitfelder, M., Gorani, F., Seifert, T., Reiter, G., Neuper, C., Pfurtscheller, G. and Muller-Putz, G. Brain motor system function in a patient with complete spinal cord injury following extensive brain-computer interface training. Exp Brain Res 190, 215-23, doi:10.1007/s00221-008-1465-y (2008).
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Esopenko, C., Borowsky, R., Cummine, J. and Sarty, G. Mapping the semantic homunculus: a functional and behavioural analysis of overt semantic generation. Brain Topogr 21, 22-35, doi:10.1007/s10548-008-0043-8 (2008).
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Felsen, G. and Mainen, Z. F. Neural substrates of sensory-guided locomotor decisions in the rat superior colliculus. Neuron 60, 137-48, doi:S0896-6273(08)00769-1 [pii]
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Fisher, L. E., Miller, M. E., Bailey, S. N., Davis, J. A., Jr., Anderson, J. S., Rhode, L., Tyler, D. J. and Triolo, R. J. Standing after spinal cord injury with four-contact nerve-cuff electrodes for quadriceps stimulation. IEEE Trans Neural Syst Rehabil Eng 16, 473-8, doi:10.1109/TNSRE.2008.2003390 (2008).
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Flegal, K. E. and Anderson, M. C. Overthinking skilled motor performance: Or why those who teach can't do. Psychon Bull Rev 15, 927-32, doi:15/5/927 [pii]
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Fowler, J. H. and Schreiber, D. Biology, politics, and the emerging science of human nature. Science 322, 912-4, doi:322/5903/912 [pii]
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Franklin, D. W., Burdet, E., Tee, K. P., Osu, R., Chew, C. M., Milner, T. E. and Kawato, M. CNS learns stable, accurate, and efficient movements using a simple algorithm. J Neurosci 28, 11165-73, doi:28/44/11165 [pii]
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Frey, S. H. Tool use, communicative gesture and cerebral asymmetries in the modern human brain. Philos Trans R Soc Lond B Biol Sci 363, 1951-7, doi:V31P786790X1M102 [pii]
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Fries, P., Womelsdorf, T., Oostenveld, R. and Desimone, R. The effects of visual stimulation and selective visual attention on rhythmic neuronal synchronization in macaque area V4. J Neurosci 28, 4823-35, doi:28/18/4823 [pii]
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Gabbard, C., Cordova, A. and Lee, S. A question of intention in motor imagery. Conscious Cogn, doi:S1053-8100(08)00116-5 [pii]
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Gangitano, M., Mottaghy, F. M. and Pascual-Leone, A. Release of premotor activity after repetitive transcranial magnetic stimulation of prefrontal cortex. Soc Neurosci 3, 289-302, doi:780817109 [pii]
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Gentilucci, M. and Dalla Volta, R. Spoken language and arm gestures are controlled by the same motor control system. Q J Exp Psychol (Colchester) 61, 944-57, doi:790266453 [pii]
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Glenberg, A. M., Sato, M., Cattaneo, L., Riggio, L., Palumbo, D. and Buccino, G. Processing abstract language modulates motor system activity. Q J Exp Psychol (Colchester) 61, 905-19, doi:790266283 [pii]
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Gorostiza, P. and Isacoff, E. Y. Optical switches for remote and noninvasive control of cell signaling. Science 322, 395-9, doi:322/5900/395 [pii]
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Gottlieb, J., Balan, P., Oristaglio, J. and Suzuki, M. Parietal control of attentional guidance: The significance of sensory, motivational and motor factors. Neurobiol Learn Mem, doi:S1074-7427(08)00172-X [pii]
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Gueugneau, N., Mauvieux, B. and Papaxanthis, C. Circadian Modulation of Mentally Simulated Motor Actions: Implications for the Potential Use of Motor Imagery in Rehabilitation. Neurorehabil Neural Repair, doi:1545968308321775 [pii]
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Haber, S. N. and Calzavara, R. The cortico-basal ganglia integrative network: The role of the thalamus. Brain Res Bull, doi:S0361-9230(08)00342-0 [pii]
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Han, F., Caporale, N. and Dan, Y. Reverberation of recent visual experience in spontaneous cortical waves. Neuron 60, 321-7, doi:S0896-6273(08)00767-8 [pii]
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Harel, R., Asher, I., Cohen, O., Israel, Z., Shalit, U., Yanai, Y., Zinger, N. and Prut, Y. Computation in spinal circuitry: lessons from behaving primates. Behav Brain Res 194, 119-28, doi:S0166-4328(08)00356-2 [pii]
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Hayden, B. Y., Nair, A. C., McCoy, A. N. and Platt, M. L. Posterior cingulate cortex mediates outcome-contingent allocation of behavior. Neuron 60, 19-25, doi:S0896-6273(08)00760-5 [pii]
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Herman, P., Prasad, G., McGinnity, T. M. and Coyle, D. Comparative analysis of spectral approaches to feature extraction for EEG-based motor imagery classification. IEEE Trans Neural Syst Rehabil Eng 16, 317-26, doi:10.1109/TNSRE.2008.926694 (2008).
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Hernandez, A., Nacher, V., Luna, R., Alvarez, M., Zainos, A., Cordero, S., Camarillo, L., Vazquez, Y., Lemus, L. and Romo, R. Procedure for recording the simultaneous activity of single neurons distributed across cortical areas during sensory discrimination. Proc Natl Acad Sci U S A 105, 16785-90, doi:0808702105 [pii]
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Holmes, P. and Calmels, C. A neuroscientific review of imagery and observation use in sport. J Mot Behav 40, 433-45, doi:75597KN814K11N17 [pii]
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Hudson, T. E., Maloney, L. T. and Landy, M. S. Optimal compensation for temporal uncertainty in movement planning. PLoS Comput Biol 4, e1000130, doi:10.1371/journal.pcbi.1000130 (2008).
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Huo, X., Wang, J. and Ghovanloo, M. A magneto-inductive sensor based wireless tongue-computer interface. IEEE Trans Neural Syst Rehabil Eng 16, 497-504, doi:10.1109/TNSRE.2008.2003375 (2008).
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Ikegami, T. and Taga, G. Decrease in cortical activation during learning of a multi-joint discrete motor task. Exp Brain Res 191, 221-36, doi:10.1007/s00221-008-1518-2 (2008).
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Imamizu, H. and Kawato, M. Neural correlates of predictive and postdictive switching mechanisms for internal models. J Neurosci 28, 10751-65, doi:28/42/10751 [pii]
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Izawa, J. and Shadmehr, R. On-line processing of uncertain information in visuomotor control. J Neurosci 28, 11360-8, doi:28/44/11360 [pii]
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Jain, N., Qi, H. X., Collins, C. E. and Kaas, J. H. Large-scale reorganization in the somatosensory cortex and thalamus after sensory loss in macaque monkeys. J Neurosci 28, 11042-60, doi:28/43/11042 [pii]
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Johnson, A. P., Cleaves, H. J., Dworkin, J. P., Glavin, D. P., Lazcano, A. and Bada, J. L. The Miller volcanic spark discharge experiment. Science 322, 404, doi:322/5900/404 [pii]
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Johnson, M. D., Franklin, R. K., Gibson, M. D., Brown, R. B. and Kipke, D. R. Implantable microelectrode arrays for simultaneous electrophysiological and neurochemical recordings. J Neurosci Methods 174, 62-70, doi:S0165-0270(08)00391-9 [pii]
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Jolls, K. R. Science students need to develop the skills of artists. Nature 455, 1175, doi:4551175b [pii]
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Julkunen, P., Saisanen, L., Danner, N., Niskanen, E., Hukkanen, T., Mervaala, E. and Kononen, M. Comparison of navigated and non-navigated transcranial magnetic stimulation for motor cortex mapping, motor threshold and motor evoked potentials. Neuroimage, doi:S1053-8119(08)01065-3 [pii]
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Friday, November 7, 2008

Oooookay, new idea

Like I said, this is a work in progress. I have access to about 10 reference managers that have varying levels of easy of use and access. Most require other people to have accounts, and those accounts are usually not free. It they are free, and usually require signing up and futsing with logins. I thought I would use Connotea because it is open to the public, but adding references is dog slow and pops up a new windows for each one (which is doesn't automatically close).Pain - in - the - patoot. The devish scheme now?

Greasemonkey and CiteULike. Greasemonkey is a Firefox extension that allows users to create little bits of Javascript code to do their bidding. There happens to be one particular script to add a PubMed page link directly to CiteULike, which is free, open, and requires no logins... AND has custom RSS feeds. Yeah. You'll be able to subscribe to the DNI paper feed.

That got me thinking that you could do that already if I just labeled the papers instead of starring them in Google Reader (then I just share the label). But, then there would be no simple, easy to read summary to post.

And in the end, I decided that I need to consider the options a little better before going all out for one of these. In other words, SPF is going to be delayed a little longer (but I promise to post it before Sf'nN)!

Any suggestions are always welcome, too!

Alllllmost ready for SPF

Yeah, "early next week" was code for "soon". I've gotten a bunch of my papers organized, thanks to a Frankensteinian scheme, and here is what's going on...

If you use Mendeley, which I love, be aware it IS STILL EARLY BETA. I stress that because there are some annoying issues that could really annoy users that try to use it exclusively and without backing up. The current version (0.5.9) has trouble with databases over 1000 documents, which can corrupt the database, leaving you back at square one. It would mean losing tags and notes, but not harming the pdfs. I have been assured that many of these issues will be addressed this month when version 0.6.0 is released. I have found a bunch of other issues that you everyday Joe (Six-Pack or Plumber, you choose) might not have the patience to figure out work around for. I'm still very happy with Mendeley and excited about the project as a whole.

So, I have been dropping my pdfs into Mendeley, using it to rename them*, and categorizing with folders. I'm starting to use Connotea to extract citation info from Pubmed and build the SPF lists (Zotero is too general, and Connotea just operates more like a science-focused system).

So, SPF will be compiled on Connotea (I think), and I'll post it here. If you want to get a peek beforehand, I'll post the public paper list link sometime today. Yeah, so SPF comin...

(And I looked at RefWorks, but we don't have the ability to share paper databases at Brown, and since it is a pay-for option, I assume others might not either.)

*-If you're using Mendeley to rename your pdfs, be careful using the "Title" field in the names. The max path length for Windows is 256 characters, and that is an easy number to beat with some paper titles alone. If this happens, you will not be able to move, delete, or rename the files. The workaround is to move the containing folder to root level (C:\), rename the file there, and then move the folder back (yes, you can move the directory, just not the individual file). For doing this to large numbers of files, grab a copy of Renamer (free) and set it to delete everything from, say, character #100 to end.